BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G06SP1|AL428272
(344 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 679 0.0
>3x_Contig1766
Length = 23951
Score = 679 bits (342), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Minus
Query: 1 atctctgagtatcgtatcatgttgagaattgaacccttaattttgtccaagtgtctctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atctctgagtatcgtatcatgttgagaattgaacccttaattttgtccaagtgtctctct 523
Query: 61 tctattgttccagcctttctagtcagttcccgtttacgtgtagcatagcctgtcaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tctattgttccagcctttctagtcagttcccgtttacgtgtagcatagcctgtcaagaag 463
Query: 121 cggcccagagcttatacgagacgatttcatttgacatgtctgggattttccccttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cggcccagagcttatacgagacgatttcatttgacatgtctgggattttccccttctttt 403
Query: 181 tcgattgctccaattttggagaactgccgcgtttaacgcgttttgcagtgcggttgtgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcgattgctccaattttggagaactgccgcgtttaacgcgttttgcagtgcggttgtgag 343
Query: 241 gggaaatcaatgtggatccagccggtcgcaccgggtcatccatccatccagttttttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gggaaatcaatgtggatccagccggtcgcaccgggtcatccatccatccagttttttttt 283
Query: 301 ttttgagaagagaatatttgtggagaaaaaaataakaattatag 344
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 282 ttttgagaagagaatatttgtggagaaaaaaataagaattatag 239
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9347
Number of Sequences: 1807
Number of extensions: 9347
Number of successful extensions: 408
Number of sequences better than 1.0e-20: 1
length of query: 344
length of database: 10,358,551
effective HSP length: 16
effective length of query: 328
effective length of database: 10,329,639
effective search space: 3388121592
effective search space used: 3388121592
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)